euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

89 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2020 chr1 81855784 81855784 + L1-Ta germline . no 612 .
srip8803 chr10 39098462 39098462 + L1-Ta germline . no 612 .
srip10335 chr10 88827234 88827234 - L1-Ta germline . no 612 GLUD1
srip10544 chr10 91717633 91717633 - L1-Ta germline validated no 612 .
srip13205 chr11 29463700 29463700 + L1-Ta germline . no 612 .
srip14263 chr11 41831810 41831810 - L1-Ta germline . no 612 .
srip15364 chr11 58171839 58171839 + L1-Ta germline . no 612 .
srip17214 chr11 94684376 94684376 + L1-Ta germline . no 612 .
srip18052 chr11 110377885 110377885 - L1-Ta germline . no 612 .
srip18143 chr11 112084565 112084565 + L1-Ta germline . no 612 BCO2
srip19290 chr11 134305648 134305648 - L1-Ta germline validated no 612 .
srip19914 chr12 11219230 11219230 - L1-Ta germline . no 612 PRH1-PRR4
srip20878 chr12 31353756 31353756 - L1-Ta germline . no 612 OVOS2
srip21002 chr12 33325795 33325795 - L1-Ta germline . no 612 .
srip23025 chr12 63569062 63569062 + L1-Ta germline . no 612 .
srip25537 chr12 117814443 117814443 - L1-Ta germline validated no 612 .
srip26497 chr12 126803020 126803020 - L1-Ta germline . no 612 .
srip26765 chr13 22489757 22489757 + L1-Ta germline . no 612 .
srip28184 chr13 48856543 48856543 + L1-Ta germline . no 612 .
srip28924 chr13 61462329 61462329 - L1-Ta germline . no 612 .
srip31163 chr13 79259801 79259801 - L1-Ta germline . no 612 .
srip35600 chr14 36674729 36674729 + L1-Ta germline . no 612 .
srip37349 chr14 59220402 59220402 + L1-Ta germline . no 612 .
srip40122 chr15 47507326 47507326 - L1-Ta germline . no 612 SEMA6D
srip44089 chr16 17755307 17755307 - L1-Ta germline . no 612 .
srip45194 chr16 32525620 32525620 - L1-Ta germline . no 612 .
srip46353 chr16 71028058 71028058 + L1-Ta germline validated no 612 HYDIN
srip46410 chr16 76865792 76865792 - L1-Ta germline . no 612 .
srip48446 chr17 68357410 68357410 + L1-Ta germline . no 612 .
srip50198 chr18 50097750 50097750 - L1-Ta germline . no 612 DCC
srip50931 chr18 59466376 59466376 + L1-Ta germline . no 612 .
srip52421 chr19 45444553 45444553 + L1-Ta germline . no 612 .
srip53935 chr2 35879355 35879355 + L1-Ta germline . no 612 .
srip54941 chr2 53460057 53460057 + L1-Ta germline . no 612 .
srip56254 chr2 82098046 82098046 + L1-Ta germline . no 612 .
srip58226 chr2 141852913 141852913 - L1-Ta germline . no 612 LRP1B
srip58947 chr2 147020924 147020924 + L1-Ta germline . no 612 .
srip59766 chr2 168735519 168735519 - L1-Ta germline . no 612 .
srip63182 chr20 9477922 9477922 - L1-Ta germline . no 612 .
srip64756 chr20 41952104 41952104 - L1-Ta germline . no 612 .
srip65872 chr21 19517306 19517306 - L1-Ta germline . no 612 .
srip66175 chr21 23626190 23626190 - L1-Ta germline . no 612 .
srip71431 chr3 35803162 35803162 - L1-Ta germline . no 612 ARPP21
srip72727 chr3 55788580 55788580 + L1-Ta germline validated no 612 ERC2
srip73433 chr3 59852905 59852905 + L1-Ta germline validated no 612 FHIT
srip75597 chr3 85576568 85576568 + L1-Ta germline . no 612 CADM2
srip78576 chr3 151148542 151148542 - L1-Ta germline validated no 612 MED12L
srip79332 chr3 162717309 162717309 + L1-Ta germline . no 612 .
srip80067 chr3 173917283 173917283 + L1-Ta germline . no 612 NLGN1
srip81665 chr3 187835313 187835313 - L1-Ta germline . no 612 .
srip82141 chr3 193354185 193354185 - L1-Ta germline validated no 612 OPA1
srip82586 chr4 14849037 14849037 + L1-Ta germline . no 612 .
srip84726 chr4 47007790 47007790 - L1-Ta germline . no 612 .
srip85392 chr4 57497067 57497067 - L1-Ta germline . no 612 .
srip92249 chr4 134596425 134596425 + L1-Ta germline . no 612 .
srip92639 chr4 138177325 138177325 + L1-Ta germline . no 612 .
srip92952 chr4 147225285 147225285 + L1-Ta germline validated no 612 SLC10A7
srip93846 chr4 158907270 158907270 - L1-Ta germline . no 612 .
srip97354 chr5 33031737 33031737 + L1-Ta germline . no 612 .
srip98024 chr5 33797541 33797541 - L1-Ta germline . no 612 ADAMTS12
srip100796 chr5 89450784 89450784 + L1-Ta germline validated no 612 .
srip105587 chr5 159351203 159351203 - L1-Ta germline . no 612 ADRA1B
srip105803 chr5 164495142 164495142 - L1-Ta germline . no 612 LOC100507193
srip105844 chr5 165712285 165712285 + L1-Ta germline . no 612 .
srip109542 chr6 63368207 63368207 + L1-Ta germline . no 612 .
srip111097 chr6 77980671 77980671 - L1-Ta germline . no 612 .
srip111296 chr6 81293576 81293576 - L1-Ta germline . no 612 .
srip112788 chr6 102846084 102846084 - L1-Ta germline . no 612 .
srip115052 chr6 157968734 157968734 - L1-Ta germline . no 612 ZDHHC14
srip115677 chr6 162181262 162181262 + L1-Ta germline . no 612 PARK2
srip116376 chr7 17094715 17094715 + L1-Ta germline . no 612 .
srip116823 chr7 40613004 40613004 - L1-Ta germline . no 612 C7orf10
srip119964 chr7 84901732 84901732 - L1-Ta germline . no 612 .
srip124091 chr8 4452925 4452925 - L1-Ta germline . no 612 CSMD1
srip124571 chr8 5829286 5829286 - L1-Ta germline . no 612 .
srip127212 chr8 72399219 72399219 - L1-Ta germline . no 612 .
srip128216 chr8 87315035 87315035 + L1-Ta germline . no 612 .
srip129982 chr8 131041209 131041209 + L1-Ta germline . no 612 .
srip130205 chr8 132724474 132724474 + L1-Ta germline . no 612 .
srip130381 chr8 137019478 137019478 + L1-Ta germline . no 612 .
srip131533 chr9 9236598 9236598 + L1-Ta germline . no 612 PTPRD
srip132413 chr9 30674423 30674423 - L1-Ta germline . no 612 .
srip132874 chr9 32092745 32092745 - L1-Ta germline . no 612 .
srip133384 chr9 32463888 32463888 - L1-Ta germline validated no 612 DDX58
srip136790 chrX 29269149 29269149 - L1-Ta germline . no 612 IL1RAPL1
srip140295 chrX 111229558 111229558 - L1-Ta germline . no 612 TRPC5
srip140767 chrX 119892834 119892834 - L1-Ta germline . no 612 .
srip141356 chrX 129525268 129525268 - L1-Ta germline . no 612 .
srip142164 chrX 154790187 154790187 + L1-Ta germline . no 612 TMLHE